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Global microRNA analysis of the NCI-60 cancer cell panel

MicroRNAs (miRNA) are a group of short noncoding RNAs that regulate gene expression at the posttranscriptional level. They are involved in many biological processes, including development, differentiation, apoptosis, and carcinogenesis. Because miRNAs may play a role in the initiation and progression of cancer, they comprise a novel class of promising diagnostic and prognostic molecular markers an

Efficient identification of miRNAs for classification of tumor origin

Carcinomas of unknown primary origin constitute 3% to 5% of all newly diagnosed metastatic cancers, with the primary source difficult to classify with current histological methods. Effective cancer treatment depends on early and accurate identification of the tumor; patients with metastases of unknown origin have poor prognosis and short survival. Because miRNA expression is highly tissue specific

High levels of microRNA-21 in the stroma of colorectal cancers predict short disease-free survival in stage II colon cancer patients

Approximately 25% of all patients with stage II colorectal cancer will experience recurrent disease and subsequently die within 5 years. MicroRNA-21 (miR-21) is upregulated in several cancer types and has been associated with survival in colon cancer. In the present study we developed a robust in situ hybridization assay using high-affinity Locked Nucleic Acid (LNA) probes that specifically detect

Quantitative miRNA expression analysis : comparing microarrays with next-generation sequencing

Recently, next-generation sequencing has been introduced as a promising, new platform for assessing the copy number of transcripts, while the existing microarray technology is considered less reliable for absolute, quantitative expression measurements. Nonetheless, so far, results from the two technologies have only been compared based on biological data, leading to the conclusion that, although t

Validation of Catquest-9SF-A Visual Disability Instrument to Evaluate Patient Function after Corneal Transplantation

Purpose: Catquest-9SF is a 9-item visual disability questionnaire developed for evaluating patient-reported outcome measures after cataract surgery. The aim of this study was to use Rasch analysis to determine the responsiveness of Catquest-9SF for corneal transplant patients. Methods: Patients who underwent corneal transplantation primarily to improve vision were included. One group (n = 199) com

PPC operation with low ron gasoline fuel. A study on load range on a euro 6 light duty diesel engine

Gasoline Partially Premixed Combustion (PPC) is a promising alternative combustion concept that can offer both high indicated efficiency and low exhaust emissions in terms of NOx and soot, compared to conventional diesel combustion (CDC). Previous research has shown that PPC can operate with gasoline-like fuels of varying RON numbers. Some of the most promising results come with the use of gasolin

Hanöbukten, ett viktigt övervingringsområde för sjöfåglar i södra Sverige

Hanöbukten in SE Sweden (including Blekinge archi-pelago) is an important wintering and staging area for a number of waterbird species. The inshore parts have been covered by counts from the shore during the International Waterbird Counts (IWC) since 1969. In the present study we analyze these counts for the period 1969–2014. When the counts started the total number of wintering waterbirds varied

Lokala rörelser av grågäss Anser anser i södra Sverige utanför häckningstiden

During 1984–2009, Greylag Geese Anser anser were neck-banded at two lakes six kilometres apart in southwest Scania, southernmost Sweden: 2308 at lake Yddingen and 633 at Klosterviken (part of lake Bör-ringe). Through 2013 we recorded 51 132 and 29 937 re-sightings, respectively. We analyse the distribution patterns within Scania during the post-breeding months July–March. In spite of the short dis

Age-based inventory control in a multi-echelon system with emergency replenishments

This paper deals with a two-echelon spare parts inventory system with one central warehouse and a number of local warehouses facing Poisson demand. Normally, the local warehouses replenish stock from the central warehouse. However, if a demand cannot be satisfied within a pre-determined time window, an emergency shipment is requested from an outside supplier. Moreover, as in practice, this outside

Cytochrome b561, copper, β-cleaved amyloid precursor protein and niemann-pick C1 protein are involved in ascorbate-induced release and membrane penetration of heparan sulfate from endosomal S-nitrosylated glypican-1

Ascorbate-induced release of heparan sulfate from S-nitrosylated heparan sulfate proteoglycan glypican-1 takes place in endosomes. Heparan sulfate penetrates the membrane and is transported to the nucleus. This process is dependent on copper and on expression and processing of the amyloid precursor protein. It remains unclear how exogenously supplied ascorbate can generate HS-anMan in endosomes an

Female reproductive investment in response to male phenotype in wall lizards and its implications for introgression

The likelihood that females will breed or how much they invest in reproduction can depend on the characters of their male partners. Such differential allocation may enhance or limit gene flow between hybridizing lineages, in particular when the lineages have diverged in sexually selected characters. Populations of the common wall lizard (Podarcis muralis) in some regions of Italy exhibit striking

Sexually antagonistic evolution caused by male-male competition in the pistil

Although sexual selection and sexual conflict are important evolutionary forces in animals, their significance in plants is uncertain. In hermaphroditic organisms, such as many plants, sexual conflict may occur both between mating partners (interlocus conflict) and between male and female sex roles within an individual (intralocus conflict). We performed experimental evolution, involving lines tha

Assembling oppositely charged lock and key responsive colloids: A mesoscale analog of adaptive chemistry

We have seen a considerable effort in colloid sciences to copy Nature’s successful strategies to fabricate complex functional structures through self-assembly. This includes attempts to design colloidal building blocks and their intermolecular interactions, such as creating the colloidal analogs of directional molecular interactions, molecular recognition, host-guest systems, and specific binding.

Hybrid magnetic iron oxide nanoparticles with tunable field-directed self-assembly

We describe the synthesis of hybrid magnetic ellipsoidal nanoparticles that consist of a mixture of two different iron oxide phases, hematite (α-Fe2O3) and maghemite (γ-Fe2O3), and characterize their magnetic field-driven self-assembly. We demonstrate that the relative amount of the two phases can be adjusted in a continuous way by varying the reaction time during the synthesis, leading to strongl

Seasonal variation in biogenic volatile organic compound (BVOC) emissions from Norway spruce in a Swedish boreal forest

Terpene emissions from the top-canopy layer (at 20 m) of one 118-year-old Norway spruce tree were measured between June and September 2013 using a branch chamber. Total terpene emissions varied from 0.05 to 332.5 μg gdw -1 h-1 with a peak in August. Monoterpenes dominated throughout the summer and on average accounted for 65% of the total terpene mass, followed by sesquiterpenes (29%) and isoprene